Hs04273889_g1

• Gene Symbol: LINC00890
• Gene Name: long intergenic non-protein coding RNA 890
• Gene Aliases: DKFZp686D0853
• Chromosome Location: Chr.X: 111511662 - 111522399 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00890
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033974.1		1 - 2	172		70
GenBank mRNA	BX537697.1	-	1 - 2	161		70
	DR005240.1	-	1 - 2	172		70

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB291963.1	-	1 - 2	162		Chr. X - 111511672 - 111518394 [+] on Build GRCh38	70
GenBankmRNA	DB186223.1	-	1 - 2	147		Chr. X - 111511687 - 111518409 [+] on Build GRCh38	70
GenBankmRNA	DB284868.1	-	1 - 2	159		Chr. X - 111511676 - 111518366 [+] on Build GRCh38	70

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	doublecortin	DCX	DBCN, DC, LISX, SCLH, XLIS	-99.4kb	Anti-sense	Chr. X - 111293779 - 111412232 on NCBI Build GRCh38
Downstream	ALG13, UDP-N-acetylglucosaminyltransferase subunit	ALG13	CDG1S, CXorf45, EIEE36, GLT28D1, MDS031, TDRD13, YGL047W	168.6kb	Sense	Chr. X - 111680741 - 111764164 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00011320.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X000545.hg.1

• Set Membership: Amplicon length less than or equal to 70, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR0X007309.hg.1	TC0X000545.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X007309.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X007310.hg.1	TC0X000545.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X007310.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177879.hg.1	TC0X00011320.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00177878.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177878.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177878.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177878.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177878.hg.1	TC0X00011320.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177881.hg.1	TC0X00011320.hg.1	Clariom D TC