Hs04274188_s1

• Gene Symbol: MIR3646
• Gene Name: microRNA 3646
• Gene Aliases: -
• Chromosome Location: Chr.20: 44408120 - 44408203 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MIR3646
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037419.1		1	36		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BJ995726.1	-	1	361		Chr. 20 - 44407794 - 44408195 [+] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	HNF4A antisense RNA 1	HNF4A-AS1	uc002xlx	-12.4kb	Anti-sense	Chr. 20 - 44377743 - 44395706 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 1430	LINC01430		40.6kb	Anti-sense	Chr. 20 - 44448777 - 44450557 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC2000007453.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000331.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20004705.hg.1	TC20000331.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20004705.hg.1	NR_037419.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007453.hg.1	ENST00000578301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007453.hg.1	NR_037419.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007453.hg.1	ENST00000578301.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007453.hg.1	NR_037419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000151723.hg.1	ENST00000578301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000151723.hg.1	NR_037419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000151723.hg.1	TC2000007453.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000151723.hg.1	NR_037419.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000151723.hg.1	ENST00000578301.1	Ensembl