Name: [Hs04274330_m1] [LINC01364]
Creator: Thermo Fisher Scientific
Keywords: [LINC01364] Assay, [long intergenic non-protein coding RNA 1364] Assay

Assay Details

Gene Symbol: LINC01364
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038324.1		2 - 3	193		90
GenBank mRNA	BC043534.1	-	2 - 3	193		90

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI832138.1	-	2 - 3	202		Chr. 1 - 87353685 - 87371655 [-] on Build GRCh38	90
GenBankmRNA	BX103394.1	-	2 - 3	169		Chr. 1 - 87354931 - 87371631 [-] on Build GRCh38	90

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	LIM domain only 4	LMO4		-5.9kb	Anti-sense	Chr. 1 - 87328468 - 87348923 on NCBI Build GRCh38
Downstream	PKN2 antisense RNA 1	PKN2-AS1		1.2mb	Sense	Chr. 1 - 88537513 - 88685204 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100014823.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002838.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385086	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385109	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385103	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385140	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385056	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15082041	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15082040	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355937	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385101	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355985	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385121	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385050	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355953	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355980	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385070	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355938	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385053	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355925	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385061	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385097	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355912	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385132	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15082038	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385077	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385115	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355952	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355922	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385054	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355920	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385134	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385088	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385057	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385117	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385108	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355949	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385066	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385123	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385059	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385112	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385084	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385137	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355909	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355930	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355927	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355942	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355928	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385049	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15082039	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355970	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385055	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385095	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355945	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15082033	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385139	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15082036	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355963	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385114	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355979	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385082	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355987	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355993	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355926	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385131	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355962	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385075	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00355910	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385116	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385087	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385083	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20385072	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	34580	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	81567	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	789731	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	48129	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	39393	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	609321	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	401449	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	348641	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P00115401	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P00115383	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	12476	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P15203751	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00115388	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00115395	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P10217622	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P10214706	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00115383	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P15203776	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00115401	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P00115401	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P15203776	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P00115383	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01044252.hg.1	TC01002838.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01044252.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01044252.hg.1	NR_038324.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01044251.hg.1	TC01002838.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01044251.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01044251.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	TC0100014823.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100210407.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100210407.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100210407.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100210407.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100210407.hg.1	TC0100014823.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100210406.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100210406.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100210406.hg.1	ENST00000452509.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100210406.hg.1	NR_038324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100210406.hg.1	TC0100014823.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A047877	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A047877	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1906957	BC043534.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1906957	NR_038324.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1906957	BC043534.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1906957	NR_038324.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1906957	BC043534.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1906957	NR_038324.1	human_transcriptome
Illumina Sentrix Human-6 v2 Expression BeadChip	ILMN_76100	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_76100	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1906957	BC043534.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1906957	NR_038324.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1906957	BC043534.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1906957	NR_038324.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1906957	BC043534.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1906957	NR_038324.1	human_transcriptome

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Genomic Map