Name: [Hs04274448_m1] [LINC01133]
Creator: Thermo Fisher Scientific
Keywords: [LINC01133] Assay, [long intergenic non-protein coding RNA 1133] Assay

Assay Details

Gene Symbol: LINC01133
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038849.1		2 - 3	642		126

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CB853513.1	-	1 - 2		Chr. 1 - 159976688 - 159978990 [-] on Build GRCh38	126
GenBankmRNA	AA171762.1	-	1 - 2	65	Chr. 1 - 159977039 - 159978927 [+] on Build GRCh38	126
GenBankmRNA	CA445323.1	-	1 - 2		Chr. 1 - 159976901 - 159979061 [-] on Build GRCh38	126
GenBankmRNA	AA174008.1	-	1 - 2	105	Chr. 1 - 159976999 - 159978848 [+] on Build GRCh38	126
GenBankmRNA	AA169419.1	-	1 - 2	93	Chr. 1 - 159977011 - 159978986 [+] on Build GRCh38	126
GenBankmRNA	CA428652.1	-	1 - 2		Chr. 1 - 159976842 - 159978983 [-] on Build GRCh38	126
GenBankmRNA	BX090035.1	-	1 - 2	296	Chr. 1 - 159976806 - 159979018 [+] on Build GRCh38	126
GenBankmRNA	BE392165.1	-	1 - 2	167	Chr. 1 - 159976927 - 159978984 [+] on Build GRCh38	127
GenBankmRNA	BM997633.1	-	1 - 2		Chr. 1 - 159977008 - 159979062 [-] on Build GRCh38	126

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SLAM family member 9	SLAMF9	CD2F-10, CD2F10, CD84-H1, CD84H1, SF2001	-22.4kb	Anti-sense	Chr. 1 - 159951492 - 159984730 on NCBI Build GRCh38
Downstream	phosphatidylinositol glycan anchor biosynthesis class M	PIGM	GPI-MT-I	48.6kb	Anti-sense	Chr. 1 - 160027672 - 160031993 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100010276.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001358.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543539	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543576	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136038	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543505	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543546	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136041	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543526	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543527	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136042	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602253	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136034	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602209	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543531	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602152	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602232	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602154	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543581	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543507	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602173	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543574	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602145	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136060	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136064	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136050	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602239	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543542	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543520	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602231	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543578	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543590	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543550	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543514	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543599	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543601	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543561	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602205	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602156	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543557	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602153	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543522	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602160	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543602	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602249	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136056	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602213	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602148	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543566	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136063	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543515	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543534	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602248	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602225	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543593	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602272	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543586	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543573	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602161	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136067	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543598	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136058	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602175	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543551	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543530	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543568	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543591	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543544	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543600	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602204	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543589	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543571	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602229	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543499	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602268	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543585	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602227	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543512	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543596	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602155	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602233	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543532	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543579	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543572	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543540	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602147	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543565	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543606	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602215	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543549	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543584	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136062	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543569	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543513	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543525	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543597	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543548	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543595	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543492	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543528	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543493	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543575	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543516	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602206	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543545	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543529	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543508	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00543567	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602246	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20602162	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15136037	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	62032	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	640505	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	294520	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	637598	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	37354	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	434817	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P828496	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	32568	-	-
Whole Human Genome Oligo Microarray G4112A	A_24_P828496	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_16_P00174908	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P00174908	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_24_P828496	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	68231	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	17180	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00174908	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P17864341	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00174905	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00174918	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P17864874	-	-
Agilent Human 2 cDNA Microarray (G4101A)	2259505	-	-
Agilent Human 2 cDNA Microarray (G4101A)	2259505	-	-
Agilent Human 1B Microarray G4111A	A_32_P20609	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P00174908	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_18_P17864874	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01021272.hg.1	TC01001358.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01021272.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01021272.hg.1	NR_038849.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100175365.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100175365.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100175365.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100175365.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100175365.hg.1	TC0100010276.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100175366.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100175366.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100175366.hg.1	TC0100010276.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000423943.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	ENST00000443364.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	NR_038849.1	Refseq
Affymetrix Human Clariom D Assay	TC0100010276.hg.1	NR_038849.1	Refseq

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A033216	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A033220	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A033220	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A033216	-	-

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Catalog #	4426961
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Genomic Map