Name: [Hs04274455_g1] [LINC01268]
Creator: Thermo Fisher Scientific
Keywords: [LINC01268] Assay, [long intergenic non-protein coding RNA 1268] Assay

Assay Details

Gene Symbol: LINC01268
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038863.2		2 - 3	427		97
GenBank mRNA	BC037331.1	-	2 - 3	432		97

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA374949.1	-	2 - 3	420	Chr. 6 - 113870196 - 113873340 [-] on Build GRCh38	97
GenBankmRNA	BI550199.1	-	2 - 3	433	Chr. 6 - 113869997 - 113873347 [-] on Build GRCh38	97
GenBankmRNA	BX089764.1	-	2 - 3	400	Chr. 6 - 113870228 - 113873320 [-] on Build GRCh38	97
GenBankmRNA	DA645359.1	-	2 - 3	427	Chr. 6 - 113870181 - 113873347 [-] on Build GRCh38	97

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	myristoylated alanine rich protein kinase C substrate	MARCKS	80K-L, MACS, PKCSL, PRKCSL	-4.5kb	Anti-sense	Chr. 6 - 113857335 - 113863475 on NCBI Build GRCh38
Downstream	uncharacterized FLJ34503	FLJ34503		33.7kb	Anti-sense	Chr. 6 - 113904387 - 113921642 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600012925.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06002034.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196870	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196842	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997057	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997041	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997027	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997029	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997038	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196877	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196837	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196836	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196866	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196855	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196876	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196875	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196872	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997014	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196882	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196835	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997008	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196847	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997016	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196878	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196848	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196861	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196874	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997055	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196865	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997017	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997031	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196864	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196869	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196849	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196841	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196857	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196846	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196863	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196854	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997030	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196844	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196856	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196832	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196858	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25196831	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04997037	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	759030	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3867584	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	40529	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3867584	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3867584	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P37757981	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P37757981	-	-
Agilent Human 1B Microarray G4111A	A_32_P373703	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P37757981	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	1557359_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR06025452.hg.1	TC06002034.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06025452.hg.1	ENST00000434296.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06025452.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06025450.hg.1	TC06002034.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06025450.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06025453.hg.1	TC06002034.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06025453.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06025451.hg.1	TC06002034.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06025451.hg.1	ENST00000434296.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06025451.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189278.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189278.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189278.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189278.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189278.hg.1	TC0600012925.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600189280.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189280.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189280.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189280.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189280.hg.1	TC0600012925.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012925.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189276.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189276.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189276.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189276.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189276.hg.1	TC0600012925.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600189277.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189277.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189277.hg.1	ENST00000434296.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600189277.hg.1	NR_038863.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600189277.hg.1	TC0600012925.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	1557359_at	-	-
Human Genome U133 Plus 2.0 Array	1557359_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557359_at3	-	-
Human Genome U95 Set	71130_at	-	-
Human Genome U95 Set	71130_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A030412	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A030413	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A030413	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A030412	-	-

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Genomic Map