Hs04274459_m1

• Gene Symbol: LOC100129027
• Gene Name: uncharacterized LOC100129027
• Gene Aliases: -
• Chromosome Location: Chr.21: 45827841 - 45836419 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LOC100129027
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038876.1		1 - 2	138		56
GenBank mRNA	AK123852.1	-	1 - 2	138		56

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA726376.1	-	1 - 2	138		Chr. 21 - 45830870 - 45836419 [-] on Build GRCh38	56
GenBankmRNA	DA725199.1	-	1 - 2	138		Chr. 21 - 45830862 - 45836419 [-] on Build GRCh38	56

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC105372840	LOC105372840		-235.2kb	Anti-sense	Chr. 21 - 45593664 - 45603056 on NCBI Build GRCh38
Downstream	poly(rC) binding protein 3	PCBP3	ALPHA-CP3	13.5kb	Anti-sense	Chr. 21 - 45849961 - 45942454 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100008441.hg.1
This assay targets the same location as HTA transcript cluster(s) TC21000550.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK123852.1 transcripts.

• Set Membership: Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR21006623.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21006623.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21006623.hg.1	TC21000550.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21006624.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21006624.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21006624.hg.1	TC21000550.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2100157192.hg.1	TC2100008441.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100157192.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100157192.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157192.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100157192.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157191.hg.1	TC2100008441.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100157191.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100157191.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157191.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100157191.hg.1	NR_038876.1	Refseq