Hs04274542_s1

• Gene Symbol: MIR378E
• Gene Name: microRNA 378e
• Gene Aliases: mir-378e
• Chromosome Location: Chr.5: 170028488 - 170028566 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MIR378E
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_039609.1		1	35		66

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	family with sequence similarity 196 member B	FAM196B	C5orf57	-47.7kb	Anti-sense	Chr. 5 - 169861304 - 169980740 on NCBI Build GRCh38
Downstream	forkhead box I1	FOXI1	FKH10, FKHL10, FREAC-6, FREAC6, HFH-3, HFH3	77.3kb	Sense	Chr. 5 - 170105897 - 170109725 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0500009384.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000930.hg.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500009384.hg.1	ENST00000581976.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009384.hg.1	NR_039609.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05013554.hg.1	TC05000930.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05013554.hg.1	NR_039609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500165757.hg.1	ENST00000581976.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500165757.hg.1	NR_039609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500165757.hg.1	ENST00000581976.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500165757.hg.1	NR_039609.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500165757.hg.1	TC0500009384.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500009384.hg.1	ENST00000581976.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009384.hg.1	NR_039609.1	Refseq