Hs04274791_m1

• Gene Symbol: MAMDC2-AS1
• Gene Name: MAMDC2 antisense RNA 1
• Gene Aliases: -
• Chromosome Location: Chr.9: 70153134 - 70175888 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MAMDC2-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040076.1		2 - 3	219		113
GenBank mRNA	BC043510.1	-	2 - 3	163		113

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI830228.1	-	2 - 3	162		Chr. 9 - 70153929 - 70175832 [-] on Build GRCh38	113

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chromosome 9 open reading frame 135	C9orf135		-251.3kb	Anti-sense	Chr. 9 - 69820804 - 69906237 on NCBI Build GRCh38
Downstream	SMC5 antisense RNA 1 (head to head)	SMC5-AS1	MAMDC2-AS2	44.9kb	Sense	Chr. 9 - 70216059 - 70258874 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012242.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001197.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000420573.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000420573.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000451488.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000451488.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000451488.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015324.hg.1	TC09001197.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09015324.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015324.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015326.hg.1	TC09001197.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09015326.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015326.hg.1	ENST00000448377.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015326.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015326.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015333.hg.1	TC09001197.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09015333.hg.1	ENST00000448377.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015333.hg.1	NR_040076.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015332.hg.1	TC09001197.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09015332.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015332.hg.1	ENST00000448377.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09015332.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186186.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186186.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186186.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186186.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186186.hg.1	TC0900012242.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000420573.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000420573.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000451488.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000451488.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000451488.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012242.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	ENST00000535188.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186189.hg.1	TC0900012242.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900186195.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186195.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186195.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186195.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186195.hg.1	TC0900012242.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	ENST00000377178.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	ENST00000448377.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	NR_040076.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900186194.hg.1	TC0900012242.hg.1	Clariom D TC