Name: [Hs04274854_m1] [LOC100506384]
Creator: Thermo Fisher Scientific
Keywords: [LOC100506384] Assay, [uncharacterized LOC100506384] Assay

Assay Details

Gene Symbol: LOC100506384
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040513.1		1 - 2	195		77
GenBank mRNA	DA065258.1	-	1 - 2	110		77
GenBank mRNA	DA267143.1	-	1 - 2	73		77

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB167129.1	-	1 - 2	104	Chr. 20 - 59626582 - 59628198 [-] on Build GRCh38	77
GenBankmRNA	DA282780.1	-	1 - 2	186	Chr. 20 - 59626572 - 59628279 [-] on Build GRCh38	77
GenBankmRNA	DA161520.1	-	1 - 2	101	Chr. 20 - 59626572 - 59628194 [-] on Build GRCh38	77

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	phosphatase and actin regulator 3	PHACTR3	C20orf101, H17739, PPP1R123, SCAPIN1, SCAPININ		Anti-sense	Chr. 20 - 59577497 - 59849829 on NCBI Build GRCh38
Downstream	synaptonemal complex protein 2	SYCP2	SCP-2, SCP2	235.3kb	Sense	Chr. 20 - 59863277 - 59933700 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000009664.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000997.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20013570.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013570.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013570.hg.1	NR_040513.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013570.hg.1	TC20000997.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	NR_040513.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	NR_040513.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000009664.hg.1	NR_040513.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013572.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013572.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013572.hg.1	NR_040513.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013572.hg.1	TC20000997.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	TC2000009664.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167411.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	TC2000009664.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167412.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	TC2000009664.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167409.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	ENST00000443055.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	ENST00000451510.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	NR_040513.1	Refseq
Affymetrix Human Clariom D Assay	TC2000009664.hg.1	NR_040513.1	Refseq

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System Message

Genomic Map