Hs04331652_s1

• Gene Symbol: MIR1539
• Gene Name: microRNA 1539
• Gene Aliases: MIRN1539, hsa-mir-1539
• Chromosome Location: Chr.18: 49487373 - 49487422 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MIR1539
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_031720.1		1	29		47

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB028748.1	-	1	63		Chr. 18 - 49487339 - 49491878 [+] on Build GRCh38	47
GenBankmRNA	DB443058.1	-	1	60		Chr. 18 - 49487342 - 49487782 [+] on Build GRCh38	47

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RPL17-C18orf32 readthrough	RPL17-C18orf32			Anti-sense	Chr. 18 - 49481178 - 49492565 on NCBI Build GRCh38
Downstream	ribosomal protein L17	RPL17	L17, PD-1, RPL23	1.1kb	Anti-sense	Chr. 18 - 49488481 - 49492565 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1800007296.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000174.hg.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Chr array_18 19 21	A_17_P10697019	-	-
Agilent Whole Chr array_18 19 21	A_17_P31298109	-	-
Agilent Whole Chr array_18 19 21	A_17_P10697018	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10697018	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10697019	-	-
Agilent Whole Chr array_18 19 21	A_17_P10697018	-	-
Agilent Whole Chr array_18 19 21	A_17_P31298109	-	-
Agilent Whole Chr array_18 19 21	A_17_P10697019	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10697018	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10697019	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1800007296.hg.1	ENST00000410758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007296.hg.1	NR_031720.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18002037.hg.1	ENST00000410758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002037.hg.1	NR_031720.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18002037.hg.1	TC18000174.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1800007296.hg.1	ENST00000410758.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007296.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007296.hg.1	NR_031720.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	ENST00000410758.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	NR_031720.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	TC1800007296.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	ENST00000410758.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	ENST00000581232.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149930.hg.1	NR_031720.1	Refseq