CACNA1G-AS1
Genomic Map
Back To TopAssay Details
| Gene Symbol: CACNA1G-AS1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_038439.1 | 1 - 2 | 180 | 74 | ||
| GenBank mRNA | H13333.1 | - | 1 - 2 | 126 | 74 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | spermatogenesis associated 20 | SPATA20 |
HEL-S-98, SSP411, Tisp78 |
-355.0 | Anti-sense | Chr. 17 - 50547089 - 50555852 on NCBI Build GRCh38 |
| Downstream | uncharacterized LOC101927253 | LOC101927253 | 64.9kb | Sense | Chr. 17 - 50627030 - 50631940 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1700011107.hg.1This assay targets the same location as HTA transcript cluster(s) TC17001693.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Homo sapiens
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 10813 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 857554 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 592573 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 247205 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3883116 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 19881 | - | - |
| Agilent Human Genome CGH + SNP Microarray | A_16_P57549976 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3883116 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3883116 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P03256835 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03256835 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P20669905 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P03256835 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 1559061_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022742.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022742.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022742.hg.1 | TC17001693.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022746.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022746.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022746.hg.1 | TC17001693.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022740.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022740.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022740.hg.1 | TC17001693.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000508920.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | ENST00000508920.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022741.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022741.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022741.hg.1 | TC17001693.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1700189434.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189434.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189434.hg.1 | TC1700011107.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189434.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189434.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | ENST00000508920.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | TC1700011107.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | ENST00000508920.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189436.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000508920.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | ENST00000508920.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011107.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189440.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189440.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189440.hg.1 | TC1700011107.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189440.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189440.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | NR_038439.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | TC1700011107.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | ENST00000505495.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | ENST00000505793.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189435.hg.1 | NR_038439.1 | Refseq |
| Human Genome U133 Plus 2.0 Array | 1559061_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1559061_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1559061_at10 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A008571 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A008571 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina human-6 v2.0 expression beadchip | ILMN_1824539 | - | - |
| Illumina Sentrix Human-6 v2 Expression BeadChip | 5550743 | - | - |
| Illumina HumanRef-6 v2.0 expression beadchip | ILMN_113361 | - | - |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1824539 | - | - |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1824539 | - | - |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1824539 | - | - |
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