Name: [Hs04332040_g1] [CACNA1C-AS1]
Creator: Thermo Fisher Scientific
Keywords: [CACNA1C-AS1] Assay, [CACNA1C antisense RNA 1] Assay

Assay Details

Gene Symbol: CACNA1C-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045725.1		2 - 3	265		73
GenBank mRNA	AK093746.1	-	2 - 3	226		73
GenBank mRNA	DB156888.1	-	2 - 3	265		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB144135.1	-	1 - 2	272	Chr. 12 - 2689922 - 2691075 [-] on Build GRCh38	73
GenBankmRNA	DB102345.1	-	1 - 2	313	Chr. 12 - 2689973 - 2691116 [-] on Build GRCh38	73
GenBankmRNA	DA921139.1	-	1 - 2	354	Chr. 12 - 2690014 - 2691157 [-] on Build GRCh38	73
GenBankmRNA	DB162540.1	-	1 - 2	316	Chr. 12 - 2689946 - 2691118 [-] on Build GRCh38	73
GenBankmRNA	DB137782.1	-	1 - 2	398	Chr. 12 - 2690045 - 2691200 [-] on Build GRCh38	73
GenBankmRNA	DB131663.1	-	2 - 3	227	Chr. 12 - 2689885 - 2691118 [-] on Build GRCh38	73
GenBankmRNA	DB108993.1	-	2 - 3	226	Chr. 12 - 2677614 - 2691118 [-] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	CACNA1C antisense RNA 2	CACNA1C-AS2		-17.9kb	Sense	Chr. 12 - 2668500 - 2672220 on NCBI Build GRCh38
Downstream	uncharacterized LOC283440	LOC283440		70.2kb	Sense	Chr. 12 - 2761200 - 2771669 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200009608.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001098.hg.1

Set Membership:

Amplicon length between 71 and 85

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12014530.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014530.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014530.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014530.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12014530.hg.1	TC12001098.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12014528.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014528.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014528.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014528.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12014528.hg.1	TC12001098.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12014527.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014527.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014527.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014527.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12014527.hg.1	TC12001098.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12014531.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014531.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014531.hg.1	NR_045725.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12014531.hg.1	TC12001098.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171844.hg.1	TC1200009608.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171845.hg.1	TC1200009608.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171842.hg.1	TC1200009608.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171841.hg.1	TC1200009608.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000501371.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000541673.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	ENST00000544517.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009608.hg.1	NR_045725.1	Refseq

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System Message

Genomic Map