Hs04332446_m1

• Gene Symbol: LINC01216
• Gene Name: long intergenic non-protein coding RNA 1216
• Gene Aliases: EMCN-IT3
• Chromosome Location: Chr.4: 100660279 - 100675113 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01216
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046811.1		3 - 4	436		128
GenBank mRNA	AA446329.1	-	1 - 2			128

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	endomucin	EMCN	EMCN2, MUC14	-142.2kb	Sense	Chr. 4 - 100395341 - 100518093 on NCBI Build GRCh38
Downstream	protein phosphatase 3 catalytic subunit alpha	PPP3CA	CALN, CALNA, CALNA1, CCN1, CNA1, PPP2B	357.7kb	Sense	Chr. 4 - 101023430 - 101347471 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400011435.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011435.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400178314.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400178314.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400178314.hg.1	ENST00000515728.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400178314.hg.1	NR_046811.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400178314.hg.1	TC0400011435.hg.1	Clariom D TC