Hs04332493_g1

• Gene Symbol: LINC00853
• Gene Name: long intergenic non-protein coding RNA 853
• Gene Aliases: PDZK1IP1-AS1, ncRNA-a4
• Chromosome Location: Chr.1: 47179250 - 47180339 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00853
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_047498.1		1 - 2	188		108
GenBank mRNA	AI792909.1	-	1 - 2	188		108

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI766054.1	-	1 - 2			Chr. 1 - 47179215 - 47180029 [-] on Build GRCh38	108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	cytochrome P450 family 4 subfamily A member 22	CYP4A22		-29.5kb	Sense	Chr. 1 - 47137425 - 47149738 on NCBI Build GRCh38
Downstream	PDZK1 interacting protein 1	PDZK1IP1	DD96, MAP17, SPAP	3.3kb	Anti-sense	Chr. 1 - 47183589 - 47190099 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100008186.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008186.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158623.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158623.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158623.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158623.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158623.hg.1	TC0100008186.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100158631.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158631.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158631.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158631.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158631.hg.1	TC0100008186.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100158633.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158633.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158633.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158633.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158633.hg.1	TC0100008186.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100158622.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158622.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158622.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158622.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158622.hg.1	TC0100008186.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100158629.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158629.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158629.hg.1	ENST00000429328.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100158629.hg.1	NR_047498.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100158629.hg.1	TC0100008186.hg.1	Clariom D TC