Hs04332610_g1

• Gene Symbol: SNX17
• Gene Name: sorting nexin 17
• Gene Aliases: -
• Chromosome Location: Chr.2: 27370496 - 27377533 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SNX17
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_049783.1		4 - 5	604		87
	NR_049784.1		4 - 5	580		87
	NR_049786.1		3 - 4	462		87
GenBank mRNA	AK293252.1	-	4 - 5	480		87
	AK298856.1	-	3 - 4	343		87

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA263252.1	-	4 - 5	442		Chr. 2 - 27370636 - 27373924 [+] on Build GRCh38	87
GenBankmRNA	BQ224277.1	-	4 - 5	428		Chr. 2 - 27370648 - 27374744 [+] on Build GRCh38	87
GenBankmRNA	BP379371.1	-	4 - 5	458		Chr. 2 - 27370617 - 27373892 [+] on Build GRCh38	87
GenBankmRNA	DA259406.1	-	4 - 5	459		Chr. 2 - 27370617 - 27373883 [+] on Build GRCh38	87
GenBankmRNA	DC299401.1	-	4 - 5	480		Chr. 2 - 27370620 - 27373886 [+] on Build GRCh38	87
GenBankmRNA	DC337598.1	-	3 - 4	343		Chr. 2 - 27370615 - 27374159 [+] on Build GRCh38	87
GenBankmRNA	DC305670.1	-	3 - 4	338		Chr. 2 - 27370620 - 27374111 [+] on Build GRCh38	87
GenBankmRNA	DC366374.1	-	3 - 4	343		Chr. 2 - 27370615 - 27373970 [+] on Build GRCh38	87
GenBankmRNA	BI761363.1	-	3 - 4	331		Chr. 2 - 27370633 - 27374758 [+] on Build GRCh38	88
GenBankmRNA	DB029853.1	-	4 - 5	497		Chr. 2 - 27370579 - 27373896 [+] on Build GRCh38	87
GenBankmRNA	DA876290.1	-	4 - 5	456		Chr. 2 - 27370620 - 27373904 [+] on Build GRCh38	87
GenBankmRNA	BP341199.1	-	4 - 5	455		Chr. 2 - 27370620 - 27373924 [+] on Build GRCh38	87
GenBankmRNA	BG437427.1	-	4 - 5	449		Chr. 2 - 27370628 - 27374393 [+] on Build GRCh38	87
GenBankmRNA	DA946195.1	-	4 - 5	456		Chr. 2 - 27370620 - 27373893 [+] on Build GRCh38	87
GenBankmRNA	DB032395.1	-	4 - 5	459		Chr. 2 - 27370617 - 27373927 [+] on Build GRCh38	87
GenBankmRNA	DA528095.1	-	4 - 5	456		Chr. 2 - 27370620 - 27373944 [+] on Build GRCh38	87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	eukaryotic translation initiation factor 2B subunit delta	EIF2B4	EIF-2B, EIF2B, EIF2Bdelta	-2.6kb	Anti-sense	Chr. 2 - 27364352 - 27370457 on NCBI Build GRCh38
Downstream	zinc finger protein 513	ZNF513	HMFT0656, RP58	3.9kb	Anti-sense	Chr. 2 - 27377231 - 27380866 on NCBI Build GRCh38

More Information

Additional Information:

This assay is in the 5'UTR region of the AK293252.1, AK298856.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

cardiac septum development
cholesterol catabolic process
intracellular protein transport
receptor-mediated endocytosis
signal transduction
endosomal transport
regulation of endocytosis
aorta development
coronary vasculature development
retrograde transport, endosome to plasma membrane

Function(s)

receptor binding
protein binding
protein C-terminus binding
phosphatidylinositol binding
low-density lipoprotein particle receptor binding