Hs04332638_s1

• Gene Symbol: MIR5188
• Gene Name: microRNA 5188
• Gene Aliases: mir-5188
• Chromosome Location: Chr.12: 124915547 - 124915659 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MIR5188
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_049820.1		1	59		87

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BE048225.1	-	1	248		Chr. 12 - 124915358 - 124915821 [+] on Build GRCh38	87
GenBankmRNA	BX103310.1	-	1	85		Chr. 12 - 124915521 - 124915989 [+] on Build GRCh38	87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ubiquitin C	UBC	HMG20	-506.0	Anti-sense	Chr. 12 - 124911645 - 124915041 on NCBI Build GRCh38
Downstream	transfer RNA-Phe (GAA) 1-4	TRF-GAA1-4	TRF-GAA1-2, TRNAF2	12.2kb	Anti-sense	Chr. 12 - 124927843 - 124927915 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1200009298.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200009298.hg.1	ENST00000583467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009298.hg.1	NR_049820.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200169311.hg.1	ENST00000583467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200169311.hg.1	NR_049820.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200169311.hg.1	ENST00000583467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200169311.hg.1	NR_049820.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200169311.hg.1	TC1200009298.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200009298.hg.1	ENST00000583467.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009298.hg.1	NR_049820.1	Refseq