Assay Details

Gene Symbol: MIR5680
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_049859.1		1	45		71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	neurocalcin delta	NCALD		-525.0	Anti-sense	Chr. 8 - 101686542 - 102124907 on NCBI Build GRCh38
Downstream	ribonucleotide reductase regulatory TP53 inducible subunit M2B	RRM2B	MTDPS8A, MTDPS8B, P53R2	79.0kb	Anti-sense	Chr. 8 - 102204501 - 102239118 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0800008430.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0800008430.hg.1	ENST00000577577.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800008430.hg.1	NR_049859.1	Refseq
Affymetrix Human Clariom D Assay	TC0800008430.hg.1	ENST00000577577.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800008430.hg.1	NR_049859.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800157929.hg.1	ENST00000577577.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157929.hg.1	NR_049859.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800157929.hg.1	ENST00000577577.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157929.hg.1	NR_049859.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800157929.hg.1	TC0800008430.hg.1	Clariom D TC

System Message

Genomic Map