Hs04332668_g1

• Gene Symbol: TRERNA1
• Gene Name: translation regulatory long non-coding RNA 1
• Gene Aliases: LINC00651, treRNA
• Chromosome Location: Chr.20: 50040707 - 50041629 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRERNA1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_051976.1		1 - 2	251		70
GenBank mRNA	AI654216.1	-	1 - 2			70
	BX118093.1	-	1 - 2	252		70

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	snail family transcriptional repressor 1	SNAI1	SLUGH2, SNA, SNAH, SNAIL, SNAIL1, dJ710H13.1	-51.8kb	Anti-sense	Chr. 20 - 49982976 - 49988886 on NCBI Build GRCh38
Downstream	ubiquitin conjugating enzyme E2 V1	UBE2V1	CIR1, CROC-1, CROC1, UBE2V, UEV-1, UEV1, UEV1A	39.5kb	Sense	Chr. 20 - 50081124 - 50115959 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000009408.hg.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000009408.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009408.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000009408.hg.1	NR_051976.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000009408.hg.1	NR_051976.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000009408.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165797.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000165797.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165797.hg.1	TC2000009408.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000165797.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165797.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009408.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009408.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000009408.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	TC2000009408.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	TC2000009408.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165796.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000165796.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165796.hg.1	TC2000009408.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000165796.hg.1	ENST00000431460.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000165796.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165798.hg.1	NR_051976.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000165798.hg.1	TC2000009408.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000165798.hg.1	NR_051976.1	Refseq