Hs04332762_m1

• Gene Symbol: TFAM
• Gene Name: transcription factor A, mitochondrial
• Gene Aliases: MTTF1, MTTFA, TCF6, TCF6L1, TCF6L2, TCF6L3
• Chromosome Location: Chr.10: 58385143 - 58399230 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TFAM
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_073073.1		3 - 4	686		95

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BF085659.1	-		156		Chr. - - [-] on Build	95
GenBankmRNA	BI831665.1	-	3 - 4	502		Chr. 10 - 58385345 - 58388822 [+] on Build GRCh38	95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ubiquitin conjugating enzyme E2 D1	UBE2D1	E2(17)KB1, SFT, UBC4/5, UBCH5, UBCH5A	-15.9kb	Sense	Chr. 10 - 58334979 - 58370753 on NCBI Build GRCh38
Downstream	BicC family RNA binding protein 1	BICC1	BICC, CYSRD	124.7kb	Sense	Chr. 10 - 58512970 - 58831437 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000007701.hg.1

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

DNA-dependent DNA replication
regulation of transcription from RNA polymerase I promoter
transcription from RNA polymerase II promoter
transcription from mitochondrial promoter
transcription initiation from mitochondrial promoter
mitochondrion organization
mitochondrial respiratory chain complex assembly
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription coactivator binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein binding
DNA binding, bending
heat shock protein binding
poly(A) RNA binding
mitochondrial light strand promoter sense binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000373895.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000373899.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000395377.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000487519.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	NM_001270782.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	NM_003201.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	NR_073073.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000373895.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000373899.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000395377.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	ENST00000487519.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	NM_001270782.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	NM_003201.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	NR_073073.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152333.hg.1	TC1000007701.hg.1	Clariom D TC