Hs04333048_m1

• Gene Symbol: ADARB1
• Gene Name: adenosine deaminase, RNA specific B1
• Gene Aliases: ADAR2, DRABA2, DRADA2, RED1
• Chromosome Location: Chr.21: 45074578 - 45226563 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ADARB1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027672.1		10 - 11	2982		78
	NR_027673.1		12 - 13	4035		78
	NR_027674.1		11 - 12	3917		78
	NR_073200.1		12 - 13	4037		78
GenBank mRNA	AB194369.1	-	10 - 11	2961		78
	AB194371.1	-	11 - 12	3896		78
	AF525422.1	-	12 - 13	4013		78
	AF533142.1	-	11 - 12	3895		78
	AY135659.1	-	12 - 13	4013		78
	U76421.1	-	12 - 13	4016		78

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BQ955425.1	-	1 - 2	128		Chr. 21 - 45223446 - 45226262 [+] on Build GRCh38	78

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC105372836	LOC105372836		-148.1kb	Anti-sense	Chr. 21 - 45055869 - 45073903 on NCBI Build GRCh38
Downstream	protein O-fucosyltransferase 2	POFUT2	C21orf80, FUT13	37.4kb	Anti-sense	Chr. 21 - 45263928 - 45287912 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100007402.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Homo sapiens, 1700, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

adenosine to inosine editing
mRNA processing
negative regulation of cell proliferation
negative regulation of cell migration
negative regulation of protein kinase activity by regulation of protein phosphorylation
positive regulation of viral genome replication
innate immune response
defense response to virus
regulation of cell cycle

Function(s)

double-stranded RNA adenosine deaminase activity
mRNA binding
protein binding
poly(A) RNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000348831.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000360697.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000389861.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000389863.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000437626.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000492414.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000496664.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000629643.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_001112.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_001160230.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_015833.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_015834.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_027672.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_027673.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_027674.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_073200.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	TC2100007402.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000348831.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000360697.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000389861.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000389863.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000437626.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000492414.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000496664.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	ENST00000629643.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_001112.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_001160230.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_015833.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NM_015834.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_027672.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_027673.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_027674.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100150132.hg.1	NR_073200.1	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	716112	-	-