Assay Details

Gene Symbol: MIR223
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029637.1		1	43		107

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AA845292.1	-	1		Chr. X - 66018863 - 66019228 [-] on Build GRCh38	107
GenBankmRNA	AV712697.1	-	2	129	Chr. X - 66017150 - 66019427 [+] on Build GRCh38	107
GenBankmRNA	AW192334.1	-	1		Chr. X - 66018836 - 66019228 [-] on Build GRCh38	107
GenBankmRNA	BQ010657.1	-	1		Chr. X - 66017163 - 66019228 [-] on Build GRCh38	107
GenBankmRNA	BQ012126.1	-	1		Chr. X - 66018820 - 66019228 [-] on Build GRCh38	107

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	moesin	MSN	HEL70	-276.9kb	Sense	Chr. X - 65588382 - 65741931 on NCBI Build GRCh38
Downstream	V-set and immunoglobulin domain containing 4	VSIG4	CRIg, Z39IG	2.8kb	Anti-sense	Chr. X - 66021738 - 66040125 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0X00007478.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X000356.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767753	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767770	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767751	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482440	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482453	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767764	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482459	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767796	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482466	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767794	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767771	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767803	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482423	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482439	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767745	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482452	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767805	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767752	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482443	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767785	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767769	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482457	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482422	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767760	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767749	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767806	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482465	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767795	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767792	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767798	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482480	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767774	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767776	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767791	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767783	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482433	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767747	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767790	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482430	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482448	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767782	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482429	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767775	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767784	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767765	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482427	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767793	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482424	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482475	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482477	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767759	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767750	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482452	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767760	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482453	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767759	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482448	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767749	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767775	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482424	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767785	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482443	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767796	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767784	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767765	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767793	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482457	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767771	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767776	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767753	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767750	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482459	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482433	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482440	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767745	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767782	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482423	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767803	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767764	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482430	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767770	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482427	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482480	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482475	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482465	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767769	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767806	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482466	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767783	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767774	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482439	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767747	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482477	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767798	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767794	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767795	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767791	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767805	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767752	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767751	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482422	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32482429	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767792	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11767790	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.1 ST Array	8167971	-	-
Affymetrix Human Transcriptome Array 2.0	PSR0X004570.hg.1	TC0X000356.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X004570.hg.1	ENST00000385204.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X004570.hg.1	ENST00000538676.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X004570.hg.1	ENST00000540516.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X004570.hg.1	NR_029637.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000385204.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007478.hg.1	NR_029637.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	ENST00000385204.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	NR_029637.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	ENST00000385204.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	NR_029637.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00151214.hg.1	TC0X00007478.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000385204.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000618234.4	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	ENST00000621933.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007478.hg.1	NR_029637.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3308936	NR_029637.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3308936	NR_029637.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3308936	NR_029637.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3308936	NR_029637.1	human_transcriptome

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Genomic Map