Hs04333964_g1

• Gene Symbol: OBSCN
• Gene Name: obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
• Gene Aliases: ARHGEF30, UNC89
• Chromosome Location: Chr.1: 228208013 - 228381431 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: OBSCN
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001098623.2	NP_001092093.2	39 - 40	10680		77
	NM_001271223.2	NP_001258152.2	44 - 45	11967		77
	NM_052843.3	NP_443075.3	39 - 40	10680		77
	XM_005273287.4	XP_005273344.1	43 - 44	11771		77
	XM_005273291.4	XP_005273348.1	43 - 44	11771		77
	XM_005273298.4	XP_005273355.1	43 - 44	11771		77
	XM_005273307.4	XP_005273364.1	43 - 44	11771		77
	XM_006711822.3	XP_006711885.1	43 - 44	11771		77
	XM_006711823.3	XP_006711886.1	43 - 44	11771		77
	XM_006711827.3	XP_006711890.1	43 - 44	11770		77
	XM_006711829.3	XP_006711892.1	42 - 43	11494		77
	XM_011544297.2	XP_011542599.1	43 - 44	11771		77
	XM_011544299.2	XP_011542601.1	42 - 43	11495		77
	XM_017002443.1	XP_016857932.1	43 - 44	11771		77
	XM_017002444.1	XP_016857933.1	43 - 44	11734		77
	XM_017002445.1	XP_016857934.1	43 - 44	11771		77
	XM_017002446.1	XP_016857935.1	43 - 44	11771		77
	XM_017002447.1	XP_016857936.1	43 - 44	11771		77
	XM_017002448.1	XP_016857937.1	43 - 44	11621		77
	XM_017002449.1	XP_016857938.1	43 - 44	11772		77
	XM_017002450.1	XP_016857939.1	43 - 44	11772		77
	XM_017002452.1	XP_016857941.1	43 - 44	11772		77
	XM_017002453.1	XP_016857942.1	42 - 43	11495		77
	XM_017002454.1	XP_016857943.1	42 - 43	11495		77
	XM_017002455.1	XP_016857944.1	42 - 43	11495		77
	XM_017002456.1	XP_016857945.1	42 - 43	11495		77
	XM_017002457.1	XP_016857946.1	42 - 43	11495		77
	XM_017002458.1	XP_016857947.1	43 - 44	11772		77
	XM_017002459.1	XP_016857948.1	43 - 44	11772		77
	XM_017002461.1	XP_016857950.1	43 - 44	11771		77
	XM_017002462.1	XP_016857951.1	41 - 42	11219		77
	XM_017002463.1	XP_016857952.1	41 - 42	11198		77
	XM_017002464.1	XP_016857953.1	43 - 44	11771		77
	XM_017002465.1	XP_016857954.1	43 - 44	11772		77
	XM_017002466.1	XP_016857955.1	43 - 44	11772		77
	XM_017002467.1	XP_016857956.1	43 - 44	11772		77
	XM_017002468.1	XP_016857957.1	43 - 44	11772		77
	XM_017002469.1	XP_016857958.1	43 - 44	11772		77
	XM_017002471.1	XP_016857960.1	43 - 44	11770		77
	XM_017002472.1	XP_016857961.1	43 - 44	11770		77
	XM_017002473.1	XP_016857962.1	43 - 44	11770		77
GenBank mRNA	AB046776.1	-	9 - 10	2433		77
	AJ002535.1	-	40 - 41	10677		77

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100011861.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001888.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene OBSCN

Gene Ontology Categories:

Process(es)

protein phosphorylation
multicellular organism development
regulation of Rho protein signal transduction
protein localization to M-band
positive regulation of apoptotic process
positive regulation of GTPase activity
sarcomere organization
regulation of small GTPase mediated signal transduction
mitophagy in response to mitochondrial depolarization

Function(s)

protein serine/threonine kinase activity
guanyl-nucleotide exchange factor activity
Rho guanyl-nucleotide exchange factor activity
protein binding
calmodulin binding
ATP binding
structural constituent of muscle
ankyrin binding
titin binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	TC01001888.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	ENST00000284548.11	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	ENST00000359599.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	ENST00000366707.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	ENST00000366709.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	ENST00000422127.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	ENST00000483539.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	NM_001098623.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01029420.hg.1	NM_052843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000284548.15	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000366707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000422127.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000483539.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000570156.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	NM_001098623.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	NM_001271223.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	NM_052843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000284548.15	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000366707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000422127.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000483539.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	ENST00000570156.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	NM_001098623.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	NM_001271223.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	NM_052843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100187575.hg.1	TC0100011861.hg.1	Clariom D TC