Hs04395559_m1

• Gene Symbol: RFX3-AS1
• Gene Name: RFX3 antisense RNA 1
• Gene Aliases: CVAT7
• Chromosome Location: Chr.9: 3668086 - 3691756 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: RFX3-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121586.1		1 - 2	326		121
GenBank mRNA	AA765553.1	-	1 - 2			121
	BX118352.1	-	1 - 2	247		121

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA405344.1	-	1 - 2	247		Chr. 9 - 3668165 - 3674430 [+] on Build GRCh38	121

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	regulatory factor X3	RFX3		-142.1kb	Anti-sense	Chr. 9 - 3218297 - 3526001 on NCBI Build GRCh38
Downstream	GLIS family zinc finger 3	GLIS3	NDH, ZNF515	152.5kb	Anti-sense	Chr. 9 - 3824127 - 4310694 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012110.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	ENST00000427722.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	ENST00000427722.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183516.hg.1	TC0900012110.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	ENST00000427722.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	ENST00000427722.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183517.hg.1	TC0900012110.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900183520.hg.1	ENST00000427722.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183520.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183520.hg.1	ENST00000427722.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183520.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183520.hg.1	TC0900012110.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012110.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183515.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183515.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183515.hg.1	ENST00000457566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183515.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183515.hg.1	TC0900012110.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183527.hg.1	TC0900012110.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183521.hg.1	TC0900012110.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	ENST00000427722.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	NR_121586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183526.hg.1	TC0900012110.hg.1	Clariom D TC