Hs04401651_g1

• Gene Symbol: CAST
• Gene Name: calpastatin
• Gene Aliases: BS-17, PLACK
• Chromosome Location: Chr.5: 96662037 - 96774683 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CAST
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104285.1		17 - 18	1653		67
GenBank mRNA	U31346.1	-	9 - 10	885		67
	U58996.2	-	17 - 18	1632		67

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW104498.1	-	3 - 4			Chr. 5 - 96772711 - 96781694 [-] on Build GRCh38	67

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101929710	LOC101929710		-141.6kb	Sense	Chr. 5 - 95962001 - 96631085 on NCBI Build GRCh38
Downstream	endoplasmic reticulum aminopeptidase 2	ERAP2	L-RAP, LRAP	102.5kb	Sense	Chr. 5 - 96875940 - 96919703 on NCBI Build GRCh38

More Information

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

liver development
egg activation
brain development
myoblast fusion
aging
negative regulation of endopeptidase activity
animal organ regeneration
myoblast differentiation
cell-cell adhesion
negative regulation of type B pancreatic cell apoptotic process

Function(s)

protease binding
RNA binding
endopeptidase inhibitor activity
protein binding
calcium-dependent cysteine-type endopeptidase inhibitor activity
cadherin binding involved in cell-cell adhesion

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013205.hg.1	ENST00000510098.1	Ensembl