Hs04401790_m1

• Gene Symbol: SCHLAP1
• Gene Name: SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding)
• Gene Aliases: LINC00913, PCAT11, PCAT114
• Chromosome Location: Chr.2: 180692104 - 180916939 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SCHLAP1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104322.1		4 - 5	674		71
	NR_104323.1		3 - 4	573		71
GenBank mRNA	JX117421.1	-	4 - 5	674		71
	JX117422.1	-	3 - 4	573		71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	CWC22 homolog, spliceosome-associated protein	CWC22	EIF4GL, NCM, fSAPb	-816.6kb	Anti-sense	Chr. 2 - 179944876 - 180007359 on NCBI Build GRCh38
Downstream	ubiquitin conjugating enzyme E2 E3	UBE2E3	UBCH9, UbcM2	152.9kb	Sense	Chr. 2 - 180980381 - 181063427 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200010149.hg.1

• Set Membership: Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	ENST00000629145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104319.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104320.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104323.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104325.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	TC0200010149.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104319.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	ENST00000629145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104320.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104323.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104324.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200171251.hg.1	NR_104325.1	Refseq