Name: [Hs04401806_m1] [CISTR]
Creator: Thermo Fisher Scientific
Keywords: [CISTR] Assay, [chondrogenesis-associated transcript] Assay

Assay Details

Gene Symbol: CISTR
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104333.1		1 - 2	66		58
GenBank mRNA	DA125942.1	-	1 - 2	66		58

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AL449868.1	-	1 - 2	55		Chr. 12 - 53750500 - 53751823 [-] on Build GRCh38	58

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	calcium binding and coiled-coil domain 1	CALCOCO1	Cocoa, PP13275, calphoglin	-22.9kb	Sense	Chr. 12 - 53711118 - 53727523 on NCBI Build GRCh38
Downstream	HOXC13 antisense RNA	HOXC13-AS	HOXC-AS5	183.5kb	Sense	Chr. 12 - 53935328 - 53939643 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200010814.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104333.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104333.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010814.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182925.hg.1	TC1200010814.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200182926.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182926.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182926.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182926.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182926.hg.1	TC1200010814.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	ENST00000626733.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010814.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	ENST00000570015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	NR_104332.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	NR_104333.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182924.hg.1	TC1200010814.hg.1	Clariom D TC

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System Message

Genomic Map