Hs04401864_m1

• Gene Symbol: ATG5
• Gene Name: autophagy related 5
• Gene Aliases: APG5, APG5-LIKE, APG5L, ASP, hAPG5
• Chromosome Location: Chr.6: 106184476 - 106325820 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ATG5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104402.1		4 - 5	536		69
	NR_104403.1		3 - 4	408		69
GenBank mRNA	JQ918353.1	-	4 - 5	478		69
	JQ918354.1	-	3 - 4	350		69

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	PR domain 1	PRDM1	BLIMP1, PRDI-BF1	-92.0kb	Anti-sense	Chr. 6 - 106046729 - 106109939 on NCBI Build GRCh38
Downstream	absent in melanoma 1	AIM1	CRYBG1, ST4	81.0kb	Anti-sense	Chr. 6 - 106360808 - 106570449 on NCBI Build GRCh38

More Information

• Set Membership: Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
blood vessel remodeling
regulation of cytokine secretion involved in immune response
C-terminal protein lipidation
autophagy
apoptotic process
cellular response to nitrogen starvation
response to fungus
macroautophagy
cellular homeostasis
antigen processing and presentation of endogenous antigen
negative regulation of protein ubiquitination
aggrephagy
negative stranded viral RNA replication
vasodilation
response to drug
negative regulation of apoptotic process
post-translational protein modification
nucleophagy
negative thymic T cell selection
innate immune response
otolith development
regulation of release of sequestered calcium ion into cytosol
ventricular cardiac muscle cell development
heart contraction
negative regulation of cell death
protein lipidation involved in autophagosome assembly
positive regulation of mucus secretion
regulation of cilium assembly
positive regulation of mitophagy
negative regulation of reactive oxygen species metabolic process
negative regulation of histone H4-K16 acetylation

Function(s)

protein binding
Atg8 ligase activity