Hs04402265_m1

• Gene Symbol: HRAT5
• Gene Name: heart tissue-associated transcript 5
• Gene Aliases: -
• Chromosome Location: Chr.5: 269556 - 271524 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HRAT5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104613.1		1 - 2	181		85
GenBank mRNA	BU930695.1	-	1 - 2	170		85

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	HY027657.1	-		181		Chr. - - [-] on Build	85
GenBankmRNA	AA412594.1	-	1 - 2			Chr. 5 - 269858 - 271516 [-] on Build GRCh38	85
GenBankmRNA	AI688470.1	-	1 - 2			Chr. 5 - 269897 - 271462 [+] on Build GRCh38	85
GenBankmRNA	AA400576.1	-	1 - 2	153		Chr. 5 - 269964 - 271497 [-] on Build GRCh38	85
GenBankmRNA	HY211836.1	-	1 - 2			Chr. 5 - 269808 - 271394 [+] on Build GRCh38	85
GenBankmRNA	AA400469.1	-	1 - 2			Chr. 5 - 269904 - 271432 [+] on Build GRCh38	85
GenBankmRNA	AA412558.1	-	1 - 2	172		Chr. 5 - 269936 - 271515 [-] on Build GRCh38	85
GenBankmRNA	BX116811.1	-	1 - 2	153		Chr. 5 - 269904 - 271496 [-] on Build GRCh38	85
GenBankmRNA	AI138864.1	-	1 - 2			Chr. 5 - 269904 - 271459 [+] on Build GRCh38	85

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	succinate dehydrogenase complex flavoprotein subunit A	SDHA	CMD1GG, FP, PGL5, SDH1, SDH2, SDHF	-4.7kb	Anti-sense	Chr. 5 - 218223 - 264816 on NCBI Build GRCh38
Downstream	programmed cell death 6	PDCD6	ALG-2, ALG2, PEF1B	97.0	Anti-sense	Chr. 5 - 271621 - 314974 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500009789.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168992.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168992.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168992.hg.1	TC0500009789.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009789.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168993.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500168993.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168993.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500168993.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168993.hg.1	TC0500009789.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500168995.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500168995.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168995.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500168995.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168995.hg.1	TC0500009789.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500168994.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500168994.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168994.hg.1	ENST00000512642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500168994.hg.1	NR_104613.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500168994.hg.1	TC0500009789.hg.1	Clariom D TC