Assay Details

Gene Symbol: MIR8079
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_107046.1		1	37		69

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB075935.1	-	1			Chr. 13 - 44196006 - 44197298 [+] on Build GRCh38	69
GenBankmRNA	DB073928.1	-	1			Chr. 13 - 44196006 - 44197286 [+] on Build GRCh38	69

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	small integral membrane protein 2	SMIM2	C13orf44	-34.9kb	Sense	Chr. 13 - 44143151 - 44161257 on NCBI Build GRCh38
Downstream	stress-associated endoplasmic reticulum protein family member 2	SERP2	C13orf21, bA269C23.1	177.6kb	Anti-sense	Chr. 13 - 44373842 - 44397714 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1300008782.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1300008782.hg.1	ENST00000610873.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300008782.hg.1	NR_107046.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300159225.hg.1	ENST00000610873.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300159225.hg.1	NR_107046.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300159225.hg.1	ENST00000610873.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300159225.hg.1	NR_107046.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300159225.hg.1	TC1300008782.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1300008782.hg.1	ENST00000610873.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300008782.hg.1	NR_107046.1	Refseq

System Message

Genomic Map