Name: [Hs04402694_m1] [LINC01251]
Creator: Thermo Fisher Scientific
Keywords: [LINC01251] Assay, [long intergenic non-protein coding RNA 1251] Assay

Assay Details

Gene Symbol: LINC01251
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109755.1		1 - 2	134		100
GenBank mRNA	BX115224.1	-	1 - 2	141		100

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA861403.1	-	1 - 2			Chr. 9 - 33732973 - 33738413 [+] on Build GRCh38	100
GenBankmRNA	BG188196.1	-	1 - 2			Chr. 9 - 33732990 - 33738367 [+] on Build GRCh38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	PTENP1 antisense RNA	PTENP1-AS	PTENP1as, PTENpg1-asRNA	-45.0kb	Anti-sense	Chr. 9 - 33677268 - 33688011 on NCBI Build GRCh38
Downstream	protease, serine 3	PRSS3	MTG, PRSS4, T9, TRY3, TRY4	12.1kb	Anti-sense	Chr. 9 - 33750466 - 33799231 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012223.hg.1

Set Membership:

Amplicon length between 86 and 100

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	NR_109755.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	NR_109755.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012223.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185852.hg.1	TC0900012223.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185851.hg.1	TC0900012223.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012223.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	ENST00000422764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	ENST00000444956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	NR_109755.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900185853.hg.1	TC0900012223.hg.1	Clariom D TC

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System Message

Genomic Map