Hs04402698_m1

• Gene Symbol: LINC00339
• Gene Name: long intergenic non-protein coding RNA 339
• Gene Aliases: HSPC157, NCRNA00339
• Chromosome Location: Chr.1: 22025191 - 22031224 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00339
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109761.1		1 - 2	137		97
GenBank mRNA	BG432520.1	-	1 - 2	131		97

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101928043	LOC101928043			Anti-sense	Chr. 1 - 22023994 - 22026048 on NCBI Build GRCh38
Downstream	cell division cycle 42	CDC42	CDC42Hs, G25K, TKS	25.1kb	Sense	Chr. 1 - 22052627 - 22092943 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100007267.hg.1

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	ENST00000420503.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	NR_109761.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	NR_109762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	TC0100007267.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	NR_109762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	ENST00000420503.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100150554.hg.1	NR_109761.1	Refseq