Hs04403266_m1

• Gene Symbol: TYW5
• Gene Name: tRNA-yW synthesizing protein 5
• Gene Aliases: C2orf60, hTYW5
• Chromosome Location: Chr.2: 199928911 - 199955736 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TYW5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109907.1		1 - 2	347		71
GenBank mRNA	AK095272.1	-	1 - 2	111		71

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA440613.1	-	1 - 2	111		Chr. 2 - 199933307 - 199955500 [-] on Build GRCh38	71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chromosome 2 open reading frame 69	C2orf69		-15.5kb	Anti-sense	Chr. 2 - 199911256 - 199928273 on NCBI Build GRCh38
Downstream	spermatogenesis associated serine rich 2 like	SPATS2L	DNAPTP6, SGNP	350.1kb	Anti-sense	Chr. 2 - 200305881 - 200482263 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200015377.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK095272.1 transcripts.

• Set Membership: Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

tRNA modification
wybutosine biosynthetic process
oxidation-reduction process

Function(s)

tRNA binding
iron ion binding
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000354611.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000441832.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000452512.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000483328.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000493181.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NM_001039693.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_004862.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_109905.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_109906.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_109907.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000354611.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000441832.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000452512.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000483328.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	ENST00000493181.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NM_001039693.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_004862.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_109905.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_109906.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	NR_109907.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200212768.hg.1	TC0200015377.hg.1	Clariom D TC