Name: [Hs04403278_g1] [CTD-3080P12.3]
Creator: Thermo Fisher Scientific
Keywords: [CTD-3080P12.3] Assay, [uncharacterized LOC101928857] Assay

Assay Details

Gene Symbol: CTD-3080P12.3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109911.1		3 - 4	1314		92
GenBank mRNA	AK091791.1	-	3 - 4	1314		92
GenBank mRNA	BC032469.1	-	3 - 4	1301		92

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB319322.1	-	2 - 3			Chr. 5 - 1173141 - 1175206 [+] on Build GRCh38	92

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	solute carrier family 12 member 7	SLC12A7	KCC4	-18.8kb	Sense	Chr. 5 - 1050374 - 1155887 on NCBI Build GRCh38
Downstream	solute carrier family 6 member 19	SLC6A19	B0AT1, HND	25.9kb	Anti-sense	Chr. 5 - 1201595 - 1225117 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500009846.hg.1

Set Membership:

Amplicon length between 86 and 100

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169466.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169466.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169466.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169466.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169466.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500169462.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169462.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169462.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500169470.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169470.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169470.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169470.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169470.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500169469.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169469.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169469.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169469.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169469.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500169463.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169463.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169463.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169463.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169463.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169465.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169465.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169465.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169465.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169465.hg.1	TC0500009846.hg.1	Clariom D TC

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System Message

Genomic Map