Name: [Hs04403312_m1] [LINC01424]
Creator: Thermo Fisher Scientific
Keywords: [LINC01424] Assay, [long intergenic non-protein coding RNA 1424] Assay

Assay Details

Gene Symbol: LINC01424
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109928.1		1 - 2	396		78
GenBank mRNA	BX100043.1	-	1 - 2	60		78
GenBank mRNA	HY006996.1	-	1 - 2	396		78

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA626257.1	-	1 - 2			Chr. 21 - 44802586 - 44804107 [-] on Build GRCh38	78
GenBankmRNA	HY190859.1	-	1 - 2			Chr. 21 - 44802542 - 44804112 [-] on Build GRCh38	78

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ubiquitin conjugating enzyme E2 G2	UBE2G2	UBC7	-405.0	Anti-sense	Chr. 21 - 44768580 - 44801836 on NCBI Build GRCh38
Downstream	small ubiquitin-like modifier 3	SUMO3	SMT3A, SMT3H1, SUMO-3, Smt3B	900.0	Anti-sense	Chr. 21 - 44805617 - 44818129 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100007383.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149994.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149994.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149994.hg.1	TC2100007383.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100149994.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149994.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	TC2100007383.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149993.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149993.hg.1	TC2100007383.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100149993.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149995.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149995.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149995.hg.1	TC2100007383.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100149995.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149995.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149992.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149992.hg.1	TC2100007383.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100149992.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149998.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149998.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149998.hg.1	TC2100007383.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100149998.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149998.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149997.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149997.hg.1	NR_109928.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100149997.hg.1	TC2100007383.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100149997.hg.1	ENST00000417820.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100149997.hg.1	NR_109928.1	Refseq

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System Message

Genomic Map