Hs04403343_m1

• Gene Symbol: CTD-2350J17.1
• Gene Name: uncharacterized LOC101929472
• Gene Aliases: -
• Chromosome Location: Chr.5: 15602189 - 15615002 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CTD-2350J17.1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109945.1		2 - 3	220		75
GenBank mRNA	AA448283.1	-	1 - 2			75
	AW079896.1	-	1 - 2			75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW104984.1	-	1 - 2			Chr. 5 - 15602189 - 15607325 [+] on Build GRCh38	75
GenBankmRNA	AA905541.1	-	1 - 2			Chr. 5 - 15602189 - 15607334 [+] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101929454	LOC101929454		-335.6kb	Sense	Chr. 5 - 15191646 - 15266560 on NCBI Build GRCh38
Downstream	microRNA 887	MIR887	MIRN887, hsa-mir-887	327.8kb	Anti-sense	Chr. 5 - 15935182 - 15935260 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500010184.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	ENST00000509228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	ENST00000509228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	ENST00000509228.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	ENST00000509228.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010184.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	ENST00000509228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	TC0500010184.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	ENST00000509228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171280.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171278.hg.1	ENST00000510456.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171278.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171278.hg.1	TC0500010184.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500171278.hg.1	NR_109945.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171278.hg.1	ENST00000510456.1	Ensembl