Hs04403407_m1

• Gene Symbol: ARNTL2-AS1
• Gene Name: ARNTL2 antisense RNA 1
• Gene Aliases: -
• Chromosome Location: Chr.12: 27389789 - 27446634 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ARNTL2-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109975.1		2 - 3	339		85
GenBank mRNA	BU568793.1	-	2 - 3	342		85

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI832376.1	-	2 - 3	359		Chr. 12 - 27389845 - 27446627 [-] on Build GRCh38	85

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	aryl hydrocarbon receptor nuclear translocator like 2	ARNTL2	BMAL2, CLIF, MOP9, PASD9, bHLHe6		Anti-sense	Chr. 12 - 27332854 - 27425813 on NCBI Build GRCh38
Downstream	single-pass membrane protein with coiled-coil domains 2	SMCO2	C12orf70	52.1kb	Anti-sense	Chr. 12 - 27446482 - 27506911 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200010211.hg.1

• Set Membership: Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200177322.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200177322.hg.1	NR_109975.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200177322.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200177322.hg.1	NR_109975.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200177322.hg.1	TC1200010211.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	ENST00000500498.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	NR_109975.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010211.hg.1	NR_109975.1	Refseq