Name: [Hs04403475_g1] [SAMMSON]
Creator: Thermo Fisher Scientific
Keywords: [SAMMSON] Assay, [survival associated mitochondrial melanoma specific oncogenic non-coding RNA] Assay

Assay Details

Gene Symbol: SAMMSON
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110000.1		3 - 4	522		124

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BQ229251.1	-	3 - 4	520		Chr. 3 - 69999744 - 70014157 [+] on Build GRCh38	124
GenBankmRNA	BG478802.1	-	3 - 4	525		Chr. 3 - 69999744 - 70014085 [+] on Build GRCh38	124

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	melanogenesis associated transcription factor	MITF	CMM8, MI, WS2, WS2A, bHLHe32	-45.2kb	Sense	Chr. 3 - 69739435 - 69968337 on NCBI Build GRCh38
Downstream	forkhead box P1	FOXP1	12CC4, HSPC215, MFH, QRF1, hFKH1B	939.4kb	Anti-sense	Chr. 3 - 70954714 - 71583989 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300007751.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156041.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007751.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156043.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156043.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156043.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156043.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156043.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300156036.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156036.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156036.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156036.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156036.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156038.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156037.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	ENST00000488861.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156039.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300156042.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156042.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156042.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156042.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156042.hg.1	TC0300007751.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300156044.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156044.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156044.hg.1	ENST00000483525.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300156044.hg.1	NR_110000.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300156044.hg.1	TC0300007751.hg.1	Clariom D TC

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System Message

Genomic Map