Hs04403527_m1

• Gene Symbol: LINC01234
• Gene Name: long intergenic non-protein coding RNA 1234
• Gene Aliases: LCAL84, onco-lncRNA-32
• Chromosome Location: Chr.12: 113744577 - 113773683 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01234
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110025.1		1 - 2	66		95
GenBank mRNA	AK096932.1	-	1 - 2	66		95

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA914721.1	-	1 - 2	66		Chr. 12 - 113746093 - 113773683 [-] on Build GRCh38	95
GenBankmRNA	DA533939.1	-	1 - 2	66		Chr. 12 - 113746184 - 113773683 [-] on Build GRCh38	95
GenBankmRNA	DA388586.1	-	1 - 2	67		Chr. 12 - 113746091 - 113773684 [-] on Build GRCh38	95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	LHX5 antisense RNA 1 (head to head)	LHX5-AS1	locus 4010, locus4010	-264.1kb	Anti-sense	Chr. 12 - 113472003 - 113480481 on NCBI Build GRCh38
Downstream	RNA binding motif protein 19	RBM19		43.1kb	Sense	Chr. 12 - 113816738 - 113966371 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200012000.hg.1

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000510694.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000547963.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550223.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550223.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550905.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550905.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	NR_110025.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	NR_110026.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000510694.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000547963.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550223.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550223.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550905.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	ENST00000550905.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	NR_110025.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	NR_110026.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200193488.hg.1	TC1200012000.hg.1	Clariom D TC