Name: [Hs04403939_m1] [PHACTR2-AS1]
Creator: Thermo Fisher Scientific
Keywords: [PHACTR2-AS1] Assay, [PHACTR2 antisense RNA 1] Assay

Assay Details

Gene Symbol: PHACTR2-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027113.2		2 - 3	614		87
	NR_027114.2		2 - 3	1019		87
	NR_110149.1		2 - 3	356		87
GenBank mRNA	AK093151.1	-	2 - 3	987		87
	AK098520.1	-	2 - 3	614		87
	BC033369.1	-	2 - 3	1019		87

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	HY244028.1	-	1 - 2			Chr. 6 - 143555086 - 143561291 [+] on Build GRCh38	87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	fucosidase, alpha-L- 2, plasma	FUCA2	dJ20N2.5	-42.2kb	Sense	Chr. 6 - 143494812 - 143511883 on NCBI Build GRCh38
Downstream	phosphatase and actin regulator 2	PHACTR2	C6orf56	50.0kb	Anti-sense	Chr. 6 - 143608180 - 143831185 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600013428.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06002188.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06027411.hg.1	TC06002188.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06027411.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06027411.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06027411.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06027418.hg.1	TC06002188.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06027418.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	ENST00000450575.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_027114.2	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110148.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	TC0600013428.hg.1	NR_110149.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600192756.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600192756.hg.1	NR_027113.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600192756.hg.1	TC0600013428.hg.1	Clariom D TC

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Genomic Map