Hs04404396_m1

• Gene Symbol: LINC01159
• Gene Name: long intergenic non-protein coding RNA 1159
• Gene Aliases: linc-Brn1b
• Chromosome Location: Chr.2: 104865497 - 104872595 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01159
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110373.1		1 - 2	352		61
GenBank mRNA	AK095498.1	-	1 - 2	141		61

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA790798.1	-	1 - 2	182		Chr. 2 - 104868023 - 104872425 [-] on Build GRCh38	61
GenBankmRNA	DA810590.1	-	1 - 2	108		Chr. 2 - 104867964 - 104872351 [-] on Build GRCh38	61
GenBankmRNA	DA804718.1	-	1 - 2	140		Chr. 2 - 104867961 - 104872383 [-] on Build GRCh38	61
GenBankmRNA	DA330543.1	-	1 - 2	209		Chr. 2 - 104868039 - 104872452 [-] on Build GRCh38	61
GenBankmRNA	DA483095.1	-	1 - 2	141		Chr. 2 - 104867762 - 104872384 [-] on Build GRCh38	61

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	POU class 3 homeobox 3	POU3F3	BRN1, OTF8, brain-1, oct-8	-8.5kb	Anti-sense	Chr. 2 - 104854068 - 104858574 on NCBI Build GRCh38
Downstream	uncharacterized LOC102724691	LOC102724691		63.6kb	Sense	Chr. 2 - 104936241 - 105038496 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200013735.hg.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200680.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200680.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200680.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200680.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200680.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200683.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200685.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200686.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200686.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200686.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200686.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200686.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200682.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200682.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200682.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200682.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200682.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200693.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200679.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200684.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200684.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200684.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200684.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200684.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200200692.hg.1	TC0200013735.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000433433.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000434764.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	ENST00000454183.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110373.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110374.1	Refseq
Affymetrix Human Clariom D Assay	TC0200013735.hg.1	NR_110374.1	Refseq