Hs04404471_g1

• Gene Symbol: RTCA-AS1
• Gene Name: RTCA antisense RNA 1
• Gene Aliases: -
• Chromosome Location: Chr.1: 100264742 - 100266174 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: RTCA-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110434.1		1 - 2	169		100
	NR_110435.1		1 - 2	169		100
GenBank mRNA	DA390082.1	-	1 - 2	169		100
	DA695476.1	-	1 - 2	120		100

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AL711488.1	-	1 - 2	124		Chr. 1 - 100263884 - 100266122 [-] on Build GRCh38	100
GenBankmRNA	DB011951.1	-	1 - 2	120		Chr. 1 - 100264931 - 100266125 [-] on Build GRCh38	100
GenBankmRNA	DA243931.1	-	1 - 2	140		Chr. 1 - 100264886 - 100266145 [-] on Build GRCh38	100
GenBankmRNA	HY099749.1	-	1 - 2	118		Chr. 1 - 100261089 - 100266122 [-] on Build GRCh38	100
GenBankmRNA	BX954255.1	-	1 - 2	112		Chr. 1 - 100264760 - 100266116 [-] on Build GRCh38	100
GenBankmRNA	DA823124.1	-	1 - 2	117		Chr. 1 - 100264898 - 100266122 [-] on Build GRCh38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RNA 3'-terminal phosphate cyclase	RTCA	RPC, RTC1, RTCD1		Anti-sense	Chr. 1 - 100266158 - 100292769 on NCBI Build GRCh38
Downstream	microRNA 553	MIR553	MIRN553, hsa-mir-553	15.1kb	Anti-sense	Chr. 1 - 100281241 - 100281308 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015062.hg.1

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212228.hg.1	TC0100015062.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100212232.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212232.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212232.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212232.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212232.hg.1	TC0100015062.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212229.hg.1	TC0100015062.hg.1	Clariom D TC