PCSK9
Genomic Map
Back To TopAssay Details
| Gene Symbol: PCSK9 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_110451.1 | 6 - 7 | 962 | 70 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | barttin CLCNK type accessory beta subunit | BSND |
BART, DFNB73 |
-49.2kb | Sense | Chr. 1 - 54998944 - 55008792 on NCBI Build GRCh38 |
| Downstream | ubiquitin specific peptidase 24 | USP24 | 7.7kb | Anti-sense | Chr. 1 - 55066359 - 55215374 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100008417.hg.1Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Homo sapiens
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
kidney development
liver development
negative regulation of receptor recycling
positive regulation of receptor internalization
triglyceride metabolic process
phospholipid metabolic process
apoptotic process
lysosomal transport
cholesterol metabolic process
cellular response to starvation
regulation of receptor activity
negative regulation of low-density lipoprotein particle clearance
protein autoprocessing
neurogenesis
neuron differentiation
low-density lipoprotein particle receptor catabolic process
positive regulation of low-density lipoprotein particle receptor catabolic process
cellular response to insulin stimulus
lipoprotein metabolic process
cholesterol homeostasis
regulation of neuron apoptotic process
positive regulation of neuron apoptotic process
negative regulation of receptor activity
negative regulation of sodium ion transmembrane transporter activity
serine-type endopeptidase activity
protein binding
sodium channel inhibitor activity
low-density lipoprotein particle binding
receptor inhibitor activity
apolipoprotein binding
very-low-density lipoprotein particle binding
apolipoprotein receptor binding
protein self-association
poly(A) RNA binding
low-density lipoprotein particle receptor binding
very-low-density lipoprotein particle receptor binding
kidney development
liver development
negative regulation of receptor recycling
positive regulation of receptor internalization
triglyceride metabolic process
phospholipid metabolic process
apoptotic process
lysosomal transport
cholesterol metabolic process
cellular response to starvation
regulation of receptor activity
negative regulation of low-density lipoprotein particle clearance
protein autoprocessing
neurogenesis
neuron differentiation
low-density lipoprotein particle receptor catabolic process
positive regulation of low-density lipoprotein particle receptor catabolic process
cellular response to insulin stimulus
lipoprotein metabolic process
cholesterol homeostasis
regulation of neuron apoptotic process
positive regulation of neuron apoptotic process
negative regulation of receptor activity
negative regulation of sodium ion transmembrane transporter activity
serine-type endopeptidase activity
protein binding
sodium channel inhibitor activity
low-density lipoprotein particle binding
receptor inhibitor activity
apolipoprotein binding
very-low-density lipoprotein particle binding
apolipoprotein receptor binding
protein self-association
poly(A) RNA binding
low-density lipoprotein particle receptor binding
very-low-density lipoprotein particle receptor binding
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100008417.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159950.hg.1 | TC0100008417.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159951.hg.1 | TC0100008417.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159952.hg.1 | TC0100008417.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159954.hg.1 | TC0100008417.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | ENST00000302118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | ENST00000490692.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | NM_174936.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | NR_110451.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100159949.hg.1 | TC0100008417.hg.1 | Clariom D TC |
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