Hs04404741_m1

• Gene Symbol: LINC01427
• Gene Name: long intergenic non-protein coding RNA 1427
• Gene Aliases: -
• Chromosome Location: Chr.20: 22280228 - 22282801 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01427
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110615.1		2 - 3	201		109
GenBank mRNA	AI142372.1	-	2 - 3	201		109
	AI147364.1	-	1 - 2			109
	BU568468.1	-	2 - 3	371		109
	CR627206.1	-	1 - 2	135		109

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX492416.1	-	1 - 2	143		Chr. 20 - 22280212 - 22282486 [-] on Build GRCh38	109
GenBankmRNA	BX096623.1	-	2 - 3	201		Chr. 20 - 22280270 - 22282674 [-] on Build GRCh38	109

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 1432	LINC01432		-205.6kb	Anti-sense	Chr. 20 - 22054090 - 22074654 on NCBI Build GRCh38
Downstream	uncharacterized LOC284788	LOC284788		117.9kb	Sense	Chr. 20 - 22400333 - 22420643 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000008624.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000008624.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008624.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008624.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008624.hg.1	NR_110615.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008624.hg.1	NR_110615.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008624.hg.1	NR_110615.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000160393.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000160393.hg.1	NR_110615.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000160393.hg.1	TC2000008624.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000160393.hg.1	NR_110615.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000160393.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008624.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008624.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008624.hg.1	ENST00000420928.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008624.hg.1	NR_110615.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008624.hg.1	NR_110615.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008624.hg.1	NR_110615.1	Refseq