Hs04405726_m1

• Gene Symbol: CASC11
• Gene Name: cancer susceptibility candidate 11 (non-protein coding)
• Gene Aliases: CARLo-7, LINC00990, TCONS_00014535
• Chromosome Location: Chr.8: 127700608 - 127733967 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CASC11
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_117101.1		1 - 2	140		91

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX364411.2	-	1 - 2			Chr. 8 - 127730194 - 127733963 [+] on Build GRCh38	91

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	cancer susceptibility candidate 8 (non-protein coding)	CASC8	CARLo-1, LINC00860	-248.1kb	Sense	Chr. 8 - 127289676 - 127482139 on NCBI Build GRCh38
Downstream	v-myc avian myelocytomatosis viral oncogene homolog	MYC	MRTL, MYCC, bHLHe39, c-Myc	2.1kb	Anti-sense	Chr. 8 - 127736069 - 127741434 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800011782.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	NR_117101.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	NR_117101.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	NR_117101.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	NR_117101.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179969.hg.1	TC0800011782.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000502463.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	ENST00000519071.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	NR_117101.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	NR_117101.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	TC0800011782.hg.1	NR_117102.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179968.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179968.hg.1	NR_117101.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179968.hg.1	ENST00000518376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800179968.hg.1	NR_117101.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800179968.hg.1	TC0800011782.hg.1	Clariom D TC