Hs04405873_m1

• Gene Symbol: GALNT2
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 2
• Gene Aliases: GalNAc-T2
• Chromosome Location: Chr.1: 230057789 - 230282130 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: GALNT2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_120373.1		1 - 2	215		128
GenBank mRNA	BF727269.1	-	1 - 2	149		128

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI536967.1	-	1 - 2			Chr. 1 - 230067281 - 230092028 [-] on Build GRCh38	128

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101927532	LOC101927532		-60.0kb	Sense	Chr. 1 - 230002717 - 230007162 on NCBI Build GRCh38
Downstream	piggyBac transposable element derived 5	PGBD5		229.6kb	Anti-sense	Chr. 1 - 230321646 - 230425928 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100011920.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

immunoglobulin biosynthetic process
protein O-linked glycosylation
O-glycan processing
protein O-linked glycosylation via serine
protein O-linked glycosylation via threonine

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
protein binding
manganese ion binding
carbohydrate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NR_120373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NR_120373.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100011920.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187954.hg.1	TC0100011920.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100187955.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187955.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187955.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187955.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187955.hg.1	TC0100011920.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000485438.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000488903.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000492568.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	ENST00000494106.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_001291866.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	TC0100011920.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	ENST00000366672.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	NM_004481.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	NR_120373.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100187952.hg.1	TC0100011920.hg.1	Clariom D TC