Hs04406677_m1

• Gene Symbol: PTPRD-AS1
• Gene Name: PTPRD antisense RNA 1
• Gene Aliases: -
• Chromosome Location: Chr.9: 8858018 - 8861727 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPRD-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121599.1		1 - 2	306		75
GenBank mRNA	AK094342.1	-	1 - 2	190		75
	DA788948.1	-	1 - 2	308		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA062130.1	-	1 - 2	190		Chr. 9 - 8858134 - 8860339 [+] on Build GRCh38	75
GenBankmRNA	DA491961.1	-	1 - 2			Chr. 9 - 8858162 - 8860363 [+] on Build GRCh38	76

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	transmembrane protein 261	TMEM261	C9orf123	-1.1mb	Anti-sense	Chr. 9 - 7796490 - 7799806 on NCBI Build GRCh38
Downstream	uncharacterized LOC105375972	LOC105375972		939.4kb	Sense	Chr. 9 - 9799392 - 9803791 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900006622.hg.1

• Set Membership: Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000447950.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000447950.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	ENST00000447950.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121600.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121600.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006622.hg.1	NR_121600.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000447950.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000447950.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	ENST00000447950.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121599.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121600.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121600.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006622.hg.1	NR_121600.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145330.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145330.hg.1	NR_121599.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145330.hg.1	ENST00000430766.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900145330.hg.1	NR_121599.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900145330.hg.1	TC0900006622.hg.1	Clariom D TC