Hs04406848_m1

• Gene Symbol: CASC23
• Gene Name: cancer susceptibility candidate 23 (non-protein coding)
• Gene Aliases: LINC01464
• Chromosome Location: Chr.11: 8011278 - 8016509 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CASC23
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_125366.1		2 - 3	592		96
GenBank mRNA	BC027619.2	-	2 - 3	572		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI827466.1	-	2 - 3	577		Chr. 11 - 8012185 - 8016490 [-] on Build GRCh38	96
GenBankmRNA	AI187270.1	-	1 - 2			Chr. 11 - 8012043 - 8016152 [+] on Build GRCh38	96
GenBankmRNA	AW172338.1	-	1 - 2			Chr. 11 - 8012043 - 8016179 [+] on Build GRCh38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	eukaryotic translation initiation factor 3 subunit F	EIF3F	EIF3S5, eIF3-p47	-15.1kb	Anti-sense	Chr. 11 - 7987320 - 7996171 on NCBI Build GRCh38
Downstream	tubby bipartite transcription factor	TUB	RDOB, rd5	5.5kb	Anti-sense	Chr. 11 - 8019180 - 8106107 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100010018.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	TC1100010018.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100175716.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100175716.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100175716.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100175716.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100175716.hg.1	TC1100010018.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100175714.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100175714.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100175714.hg.1	ENST00000534076.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100175714.hg.1	NR_125366.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100175714.hg.1	TC1100010018.hg.1	Clariom D TC