Hs04407060_g1

• Gene Symbol: LINC01170
• Gene Name: long intergenic non-protein coding RNA 1170
• Gene Aliases: -
• Chromosome Location: Chr.5: 124059794 - 124438520 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01170
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_125774.1		1 - 2	129		72

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	HY132412.1	-	1 - 2	127		Chr. 5 - 124386253 - 124438515 [-] on Build GRCh38	72

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	casein kinase 1 gamma 3	CSNK1G3	CKI-gamma 3, CSNK1G3L	-820.7kb	Anti-sense	Chr. 5 - 123512099 - 123617045 on NCBI Build GRCh38
Downstream	zinc finger protein 608	ZNF608	NY-REN-36	198.4kb	Sense	Chr. 5 - 124636913 - 124748824 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500011889.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181938.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181938.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181938.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181938.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181938.hg.1	TC0500011889.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181945.hg.1	TC0500011889.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500181939.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181939.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181939.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500181939.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181939.hg.1	TC0500011889.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000519703.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000520192.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	ENST00000628324.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	TC0500011889.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181949.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181949.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181949.hg.1	TC0500011889.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500181950.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181950.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181950.hg.1	TC0500011889.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500181951.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181951.hg.1	NR_125774.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500181951.hg.1	TC0500011889.hg.1	Clariom D TC