Hs04407718_m1

• Gene Symbol: PPEF1-AS1
• Gene Name: PPEF1 antisense RNA 1
• Gene Aliases: -
• Chromosome Location: Chr.X: 18688643 - 18692687 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PPEF1-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046642.1		1 - 2	68		92
GenBank mRNA	BM683329.1	-	2 - 3			92
	BM929366.1	-	1 - 2	66		92

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	retinoschisin 1	RS1	RS, XLRS1	-19.3kb	Sense	Chr. X - 18639688 - 18672103 on NCBI Build GRCh38
Downstream	PHKA2 antisense RNA 1	PHKA2-AS1		197.6kb	Anti-sense	Chr. X - 18890296 - 18894975 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00009193.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0X00009193.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00009193.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00009193.hg.1	NR_046642.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00009193.hg.1	NR_046642.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00009193.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163020.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00163020.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163020.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00163020.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163020.hg.1	TC0X00009193.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0X00009193.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00009193.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00009193.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00009193.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00009193.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163019.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00163019.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163019.hg.1	ENST00000430641.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00163019.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163019.hg.1	TC0X00009193.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00163022.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163022.hg.1	NR_046642.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00163022.hg.1	TC0X00009193.hg.1	Clariom D TC