Hs04407763_g1

• Gene Symbol: CACNA1C-IT2
• Gene Name: CACNA1C intronic transcript 2
• Gene Aliases: -
• Chromosome Location: Chr.12: 2048352 - 2049463 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CACNA1C-IT2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046768.1		1 - 2	262		96
GenBank mRNA	AI810102.1	-	1 - 2			96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI393338.1	-	1 - 2			Chr. 12 - 2048487 - 2049455 [-] on Build GRCh38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	decapping mRNA 1B	DCP1B	DCP1	-43.8kb	Anti-sense	Chr. 12 - 1941591 - 2004535 on NCBI Build GRCh38
Downstream	CACNA1C antisense RNA 4	CACNA1C-AS4		171.1kb	Anti-sense	Chr. 12 - 2220537 - 2223481 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200006485.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200006485.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006485.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006485.hg.1	NR_046768.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006485.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	TC1200006485.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006485.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200006485.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	TC1200006485.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200144632.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200144632.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200144632.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200144632.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200144632.hg.1	TC1200006485.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200144633.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200144633.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200144633.hg.1	ENST00000541871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200144633.hg.1	NR_046768.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200144633.hg.1	TC1200006485.hg.1	Clariom D TC